3-SetUp

• セットアップ
  • 　プロジェクトの概念
  • 　VBMEGの起動

セットアップ _

Under Construction

　プロジェクトの概念 _

The following directory struecture is used here for explanation. Directories that start with '$' can have arbitrary name.

$WORK___$SBJ1___data
     |       |__matlab
     |       |__result
     |       |__analysis
     |       |__figure
     |
     |__$SBJ2___data
     |       |__matlab
     |       |__result
     |       |__analysis
     |       |__figure
     |
        ...
     |__$VBMEG

$WORK

Working directory. All data and scripts are saved here.

$SBJ[n]

Data and scripts for a subject.

data

VBMEG data directory, e.g. .brain.mat file, .meg.mat file, etc.

matlab

VBMEG script directory. Some analysis needs scripts specific to the subject. Such scripts should be saved to this directory for logging purposes. Templates of scripts are stored in directory '$VBMEG/script_template'. User will copy them to $SBJ[n]/matlab and modify.

result

VBMEG estimation results (inverse filter parameters, .bayes.mat file) will be saved here.

analysis

Results of analysis based on estimated current will be saved here.

figure

Figures are saved here.

$VBMEG

You should copy VBMEG program directory to the working directory, because VBMEG program is being updated frequently at the present time.

　VBMEGの起動 _

On the MATLAB console, type the following commands:

>> mv $WORK
>> addpath('./$SBJ1/matlab/')
>> addpath('./$SBJ2/matlab/')
   ... (repeat the number of subjects)
>> addpath('$VBMEG')

$WORK is replaced by your working directory. All of VBMEG operations including your own script are executed on $WORK. $SBJ[n] is replaced by your subject directory (e.g., 'sbj1', initial of the subject, etc.). Script directories, which are specific to subjects, and VBMEG program directory are added to the MATLAB path.